AutoDock

This forum is an archive for the mailing list autodock@scripps.edu (more options) Messages posted here will be sent to this mailing list.
This list is intended for novice and expert users of the ligand-protein and protein-protein docking software AutoDock, AutoGrid and AutoDockTools (ADT). This list will provide a forum for users to share experience, to ask questions about things not covered in the documentation, and hopefully, to get answers to these questions. Questions may range from technical to scientific, but should be about docking molecules using AutoDock and its associated programs and utilities. Suggestions for new features are also welcome. Announcements of new software versions and functionalities will be made on this list. In general, bugs should not be reported here but entered into our MGLBugzilla database. Just go to http://mgldev.scripps.edu/bugs/ and click on the "Open a new MGLBugzilla account" link.
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Topics (3007)
Replies Last Post Views
ADL: AutoDock4- smooth parameter by Małgorzata Puk
1
by Diogo Martins
ADL: Autodock 4.2.6 scoring function accuracy? by Rudy J. Richardson
1
by Diogo Martins
ADL: Vina MacOS X for Catalina 64 bit (beta version) by Stefano Forli
0
by Stefano Forli
ADL: parameters files by Sophie Balou
0
by Sophie Balou
ADL: vina under MacOS X Catalina (64 bits)? by Florian Nachon-3
0
by Florian Nachon-3
ADL: helping with raccoon by imrbay
0
by imrbay
ADL: flexible residue receptor preparation by Sumudu Leelananda
2
by Sumudu Leelananda
ADL: DOcking by Suprim Tha
4
by Suprim Tha
ADL: autodock error by Padmaja Wakchaure
0
by Padmaja Wakchaure
ADL: Vina on GPUs ? by Leandro Bortot
1
by David
ADL: Problem Running Raccoon Generated Files by stephenmolnar
0
by stephenmolnar
ADL: Problem Running Raccoon Generated Files by stephenmolnar
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by stephenmolnar
ADL: Docking Anionic Ligands into Protein with Vina by Bo Li
0
by Bo Li
ADL: RESP Charges in Autodock Vina by faride badalkhani
2
by Diogo Martins
ADL: script by Mohiuddin Samrat
0
by Mohiuddin Samrat
ADL: Zero charge protein as ligand (copy,registered email) by Danilo Boskovic
0
by Danilo Boskovic
ADL: AutoGrid 4.2.7.x.2019-07-11 by stephenmolnar
2
by stephenmolnar
ADL: Covalent Autodock Vina by Luciana Maria
1
by Michel Sanner
ADL: Non-integral charges on receptor by Daniel Bauer
1
by Daniel Bauer
ADL: Dielectric values by Harmanpreet Singh
1
by Diogo Martins
ADL: W1908 1378 Please quote us for academic license or is it free? Universiteit Leiden by ISSC - Software
1
by Stefano Forli
ADL: Grid box by Translate Biology
1
by Drasko Tomic
ADL: autodock software by 谢志鹏
1
by Giovanna Laflor
ADL: autodock vina problem by Артур Болдырев
0
by Артур Болдырев
ADL: Raccoon: VS generation does not finish by Paolo Governa
0
by Paolo Governa
ADL: Regarding top results of Vina by Amit chaudhary
2
by Bakary N'tji Diallo
ADL: Hydrated AD Vina Docking by Emma Wu
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by Emma Wu
ADL: Fwd: installation error by spss4
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by spss4
ADL: RACCOON: Problem running RunVS.sh by stephenmolnar
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by stephenmolnar
ADL: Documentation for use of python scripts by ortzt .
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by ortzt .
ADL: MGL website issues by Stefano Forli
2
by Stefano Forli
ADL: Problem with covalent docking by Chhaya Singh 1820204
1
by Chhaya Singh 1820204
ADL: binding affinity in autodock vina by neelam wafa
1
by Okoro, Cosmas
ADL: Error message: can't read my grid file. by Matthew Parker
1
by Pawan Kumar
ADL: ADT error by anne
0
by anne
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