AutoDock

This forum is an archive for the mailing list autodock@scripps.edu (more options) Messages posted here will be sent to this mailing list.
This list is intended for novice and expert users of the ligand-protein and protein-protein docking software AutoDock, AutoGrid and AutoDockTools (ADT). This list will provide a forum for users to share experience, to ask questions about things not covered in the documentation, and hopefully, to get answers to these questions. Questions may range from technical to scientific, but should be about docking molecules using AutoDock and its associated programs and utilities. Suggestions for new features are also welcome. Announcements of new software versions and functionalities will be made on this list. In general, bugs should not be reported here but entered into our MGLBugzilla database. Just go to http://mgldev.scripps.edu/bugs/ and click on the "Open a new MGLBugzilla account" link.
1234 ... 86
Topics (2985)
Replies Last Post Views
ADL: autodock software by 谢志鹏
1
by Giovanna Laflor
ADL: autodock vina problem by Артур Болдырев
0
by Артур Болдырев
ADL: Raccoon: VS generation does not finish by Paolo Governa
0
by Paolo Governa
ADL: Regarding top results of Vina by Amit chaudhary
2
by Bakary N'tji Diallo
ADL: Hydrated AD Vina Docking by Emma Wu
0
by Emma Wu
ADL: Fwd: installation error by spss4
0
by spss4
ADL: RACCOON: Problem running RunVS.sh by stephenmolnar
0
by stephenmolnar
ADL: Documentation for use of python scripts by ortzt .
0
by ortzt .
ADL: MGL website issues by Stefano Forli
2
by Stefano Forli
ADL: Problem with covalent docking by Chhaya Singh 1820204
1
by Chhaya Singh 1820204
ADL: binding affinity in autodock vina by neelam wafa
1
by Okoro, Cosmas
ADL: Error message: can't read my grid file. by Matthew Parker
1
by Pawan Kumar
ADL: ADT error by anne
0
by anne
ADL: autogrid error by Chhaya Singh 1820204
12
by stephenmolnar
ADL: Protein preparation before Docking by Adupa Vasista
1
by Anil Bhattarai
ADL: To change the pdb file output file atom type ordering of the docked ligand file by manifans
0
by manifans
ADL: Can Autodock Vina work on a modified PDB comprised of amino acids around a putative binding site? by Jakubowski, Henry
0
by Jakubowski, Henry
ADL: where can i find this file : AD4.1_bound.dat by Adupa Vasista
2
by seema mehta
ADL: MGL website issues ***RESOLVED*** by Stefano Forli
0
by Stefano Forli
ADL: Python Error in MGLTOOLS by Divina
0
by Divina
ADL: software by 123
0
by 123
ADL: autodock vina score_only question by Divina
2
by Divina
ADL: 答复: MGL website issues by march_happy
1
by Stefano Forli
ADL: (no subject) by Adupa Vasista
0
by Adupa Vasista
ADL: autodock website down by Krishna Suresh
0
by Krishna Suresh
ADL: MGL websites issues by Stefano Forli
0
by Stefano Forli
ADL: covalent docking - HIS and ASP residues by ines martins
0
by ines martins
ADL: Reg: Different Results by Adupa Vasista
1
by Drasko Tomic
ADL: Problem with examine_ligand_dict.py by stephenmolnar
2
by stephenmolnar
ADL: build problem with MGLTools 2.0 and deprecated linux library used to build AGFR by Robi Gus
1
by Robi Gus
ADL: serious problem with ubuntu linux install of AGFR by Robi Gus
0
by Robi Gus
ADL: Problem with H - bonding atom-- need help!! by Chhaya Singh 1820204
2
by Chhaya Singh 1820204
ADL: visualize problem by ZEGHEB, Nadjiba
4
by Michel Sanner
Re: ADL: autodock Digest, Vol 171, Issue 2 vina constantly core dumps, even on a small search volume and reasonable parameters by Robi Gus
0
by Robi Gus
ADL: MGLTools - Problem Randomizing Ligand by stephenmolnar
1
by Stefano Forli
1234 ... 86