AutoDock

This forum is an archive for the mailing list autodock@scripps.edu (more options) Messages posted here will be sent to this mailing list.
This list is intended for novice and expert users of the ligand-protein and protein-protein docking software AutoDock, AutoGrid and AutoDockTools (ADT). This list will provide a forum for users to share experience, to ask questions about things not covered in the documentation, and hopefully, to get answers to these questions. Questions may range from technical to scientific, but should be about docking molecules using AutoDock and its associated programs and utilities. Suggestions for new features are also welcome. Announcements of new software versions and functionalities will be made on this list. In general, bugs should not be reported here but entered into our MGLBugzilla database. Just go to http://mgldev.scripps.edu/bugs/ and click on the "Open a new MGLBugzilla account" link.
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Topics (2914)
Replies Last Post Views
ADL: Obtain vina score of given ligand-protein pose by José Emilio Sánchez ...
4
by José Emilio Sánchez ...
ADL: Autodock4Zn by Aayush Gupta
3
by Stefano Forli
ADL: Visualization by Yu Mikame
1
by march_happy
ADL: docking validation and minimized protein by dr. sakura
3
by dr. sakura
ADL: ligand preparation by Chao Chen
2
by Diogo Martins
ADL: ADT problem by zhou jinming
0
by zhou jinming
ADL: PDB to PDBQt = Broken bonds by carlos klinger
7
by carlos klinger
Re: ADL:   Parameters for metal in lgands by Academic Research
1
by Stefano Forli
ADL: Raccoon cannot generate GPF by Samantha Hartanto
2
by Stefano Forli
ADL: Parameters for metal in lgands by Aayush Gupta
1
by Stefano Forli
ADL: Multiple dockings by Suprim Tha
7
by bokcmho
ADL: (no subject) by Zsofia Lengyel
1
by Michel Sanner
ADL: Silicon by Academic Research
0
by Academic Research
ADL: How to implement a python script to Autodock Vina by dr. sakura
7
by Michel Sanner
ADL: autodock gui and windows10 64bit by S V S
14
by S V S
ADL: problem regarding the task by Mohiuddin Samrat
8
by Sundar
ADL: Vina for docking by FRANCESCO TORRICELLA
6
by Stefano Forli
ADL: Docking for evolutionary/phylogenetic studies by ammad
1
by Diogo Martins
ADL: Regarding result analysis of structure obtained after using AutoDock Vina. by Aparna Chaturvedi
6
by Aparna Chaturvedi
ADL: Autodock and autodock tool by S V S
8
by S V S
ADL: Autodock error by Sowmya Hari
0
by Sowmya Hari
ADL: MGL websites issues ***RESOLVED*** by Stefano Forli
0
by Stefano Forli
ADL: reordering of atoms with prepare_receptor by Mariana Assmann
0
by Mariana Assmann
ADL: error by Inbar Fish
0
by Inbar Fish
ADL: MGL websites issues by Stefano Forli
0
by Stefano Forli
ADL: converting multiple pdbs to pdbqts by ADARSH BALA
2
by ADARSH BALA
ADL: Fwd: Docking ligand into multiple receptors by ADARSH BALA
13
by Cesar Millan-Pacheco
ADL: converting multiple pdbs to pdbqts by ADARSH BALA
5
by friend forever
ADL: Raccoon by Suprim Tha
0
by Suprim Tha
ADL: (no subject) by Suprim Tha
0
by Suprim Tha
ADL: script for running Batch job by MS_09
0
by MS_09
ADL: Technical Question. by 崔 峻
0
by 崔 峻
ADL: Can I dock a ligand in more than 1 receptor by autodock vina? by ADARSH BALA
2
by Stefano Forli
ADL: Diffused view of ligand and pdb by Muzaffar Rehman
1
by konan rene Kambo
ADL: AutoDock Vina in the Cloud by Sarkis Dallakian
0
by Sarkis Dallakian
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