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This forum is an archive for the mailing list autodock@scripps.edu (more options) Messages posted here will be sent to this mailing list.
This list is intended for novice and expert users of the ligand-protein and protein-protein docking software AutoDock, AutoGrid and AutoDockTools (ADT). This list will provide a forum for users to share experience, to ask questions about things not covered in the documentation, and hopefully, to get answers to these questions. Questions may range from technical to scientific, but should be about docking molecules using AutoDock and its associated programs and utilities. Suggestions for new features are also welcome. Announcements of new software versions and functionalities will be made on this list. In general, bugs should not be reported here but entered into our MGLBugzilla database. Just go to http://mgldev.scripps.edu/bugs/ and click on the "Open a new MGLBugzilla account" link.
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Topics (2687)
Replies Last Post Views
ADL: AutoDock Tools Clustering analysis via command line. by Mohammed Khaled Tumb...
1
by Diogo Martins
ADL: Fixed/focused docking in Autodock by ambreen gul
1
by Elvis Martis
ADL: AutoLigand: fails to start the GUI by Paola Andrea Santos ...
0
by Paola Andrea Santos ...
ADL: Unable to compile Vina by Yew Mun Yip
3
by Amr AL-HOSSARY
expanding Vina output by dr. sakura
2
by dr. sakura
ADL: atom order after the docking by Qasim Pars
8
by Diogo Martins
ADL: Error : could not open "ligand_out.pdbqt by Rahul Aher
0
by Rahul Aher
ADL: Vina Installation by Dipti Singharoy
1
by IQRA QADDIR
ADL: Problem in running vina program through command prompt by Rahul Aher
4
by Rahul Aher
ADL: regarding the capture of image by Neha lohia
6
by Anjela Manandhar
"protein dielectric" for DNA by dr. sakura
0
by dr. sakura
ADL: vina package not available by fatahiya mohamed tap...
0
by fatahiya mohamed tap...
ADL: atom type error while docking ligands containing Pt by Vaibhav Dixit
0
by Vaibhav Dixit
ADL: Raccoon2 Error on PBS HPC Cluster by Damjan Temelkovski
1
by Damjan Temelkovski
ADL: unable to install auto dock or auto dock vina on my machine by Priya Kashyap
2
by nic
ADL: ligand preparation in vina. by neelam wafa
4
by neelam wafa
ADL: vina MPI by chimbiomol
2
by Bennion, Brian
ADL: running autodock by neelam wafa
3
by neelam wafa
ADL: (no subject) by Huma Tahir
0
by Huma Tahir
ADL: Regarding getting error for the configuration file while running the vina prog by Rahul Aher
0
by Rahul Aher
ADL: Positive result when using score_only option by Stephanie Portelli
1
by Diogo Martins
Re: ADL: autodock Digest, Vol 143, Issue 5 by Dr Muralikrishna Kum...
0
by Dr Muralikrishna Kum...
ADL: covalent bond(autodock) by Marzieh Dehghan
4
by Mahesh
ADL: problem in running autodock4.2 by neelam wafa
0
by neelam wafa
ADL: running autogrid. by neelam wafa
0
by neelam wafa
ADL: Downloading AutoDock Vina by Githmie Goonatilleke
6
by nic
ADL: value of inhibition constant ki. by neelam wafa
2
by Stefano Forli
ADL: error-linux cluster raccoon2 by gizem tatar
0
by gizem tatar
ADL: error-linux cluster racccon2 by gizem tatar
0
by gizem tatar
ADL: Raccoon2 user account by gizem tatar
0
by gizem tatar
ADL: Docking Result Repository Survey (5 minutes) by Damjan Temelkovski
0
by Damjan Temelkovski
Bug or Error by ash
0
by ash
ADL: Draw chemical structure for Autodock vina by Chau Phi DINh
5
by Rudy J. Richardson
ADL: Error with Autogrid by Giovanna Laflor
1
by Diogo Martins
ADL: Autodock vs Autodock Vina, hidden binding sites. by Julio Dominguez
1
by Diogo Martins
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