AutoDock

This forum is an archive for the mailing list autodock@scripps.edu (more options) Messages posted here will be sent to this mailing list.
This list is intended for novice and expert users of the ligand-protein and protein-protein docking software AutoDock, AutoGrid and AutoDockTools (ADT). This list will provide a forum for users to share experience, to ask questions about things not covered in the documentation, and hopefully, to get answers to these questions. Questions may range from technical to scientific, but should be about docking molecules using AutoDock and its associated programs and utilities. Suggestions for new features are also welcome. Announcements of new software versions and functionalities will be made on this list. In general, bugs should not be reported here but entered into our MGLBugzilla database. Just go to http://mgldev.scripps.edu/bugs/ and click on the "Open a new MGLBugzilla account" link.
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Topics (3103)
Replies Last Post Views
ADL: RMSD by horse16031603
1
by Michel Sanner
ADL: Customising generated PBS script by Kyaw Tun
0
by Kyaw Tun
ADL: water molecules in active site by Sirish R Narayanan
0
by Sirish R Narayanan
ADL: HydrogenBondBuilder Error - Unable to assign HYB type to atom N by Jared Hass
0
by Jared Hass
ADL: Question about Ligand by sarah sarahii
1
by Gustavo Seabra
ADL: Finding the best conformation by Suprim Tha
0
by Suprim Tha
ADL: Binding constant vs Binding Energies by Susantha Ganegamage
0
by Susantha Ganegamage
ADL: (no subject) by ujjwalkumar das
4
by Susantha Ganegamage
ADL: Fwd: Help for multi-ligand docking method by jyotsnamayee nayak
1
by Rick Sheridan
ADL: Error about openning input pdb file of ligand by sarah sarahii
0
by sarah sarahii
ADL: What are the parameters of the Autodock vina genetic algorithm? by Levy Bueno Alves
1
by Diogo Martins
ADL: AutoDock 4.2.3 vs 4.2.6 by Elghobashi-Meinhardt...
1
by Diogo Martins
ADL: non-integral charge error by Sirish R Narayanan
1
by Mezei, Mihaly
ADL: Regarding error in AutoDock FR by dhaval patel
0
by dhaval patel
ADL: High Troughput Docking by AUTODOCK and/or VINA by cristina tomasella
2
by Cesar Millan-Pacheco
ADL: Fwd: FLEXIBLE RESIDUES by Akash Deep BISWAS
2
by Bennion, Brian
ADL: (no subject) by JOSÉ MANUEL NÁPOLES ...
1
by Rick Sheridan
ADL: Autodock opening error message by Evelyne Côté
0
by Evelyne Côté
ADL: non-intergral charge error by Sirish R Narayanan
0
by Sirish R Narayanan
ADL: Residue sets selection for site specific docking by Cn rahul
0
by Cn rahul
ADL: Virtual screening using autodock vina by Hiteshree Buch
2
by Stéphane Téletchéa-3
ADL: Program closes when trying to run a ligand-protein docking in Autodock Vina by 724372
2
by Diogo Martins
ADL: Unbound model cannot be specified in the paramter library file by Philip Jordache
1
by Diogo Martins
ADL: Question by jabreu
0
by jabreu
ADL: Zero Charge Warning in DNA by Susantha Ganegamage
1
by Van Dam, Hubertus
ADL: Simple survey - A or B by Rick Sheridan
4
by Van Dam, Hubertus
ADL: autodock software by Elhassan Elassiri
0
by Elhassan Elassiri
ADL: Hybrid small molecule doubt by Saravanan Rajamanika...
0
by Saravanan Rajamanika...
ADL: Catalina Mac OS support issue by Rick Sheridan
0
by Rick Sheridan
ADL: Managing the Catalina Mac OS issue by Rick Sheridan
0
by Rick Sheridan
ADL: AutoDockZN by Elghobashi-Meinhardt...
3
by Mohammad Qureshi
ADL: AutodockZN Fatal Error in dpf by Elghobashi-Meinhardt...
1
by Diogo Martins
ADL: Autogrid4.2 bin for AutodockZN? by Elghobashi-Meinhardt...
1
by Diogo Martins
Re: ADL: Problem about autodock by Van Dam, Hubertus
0
by Van Dam, Hubertus
ADL: Fwd: Problem about autodock by อภิสราภรณ์ ใบเจริญ
1
by Ariel Jose Arias Zep...
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