AutoDock

This forum is an archive for the mailing list autodock@scripps.edu (more options) Messages posted here will be sent to this mailing list.
This list is intended for novice and expert users of the ligand-protein and protein-protein docking software AutoDock, AutoGrid and AutoDockTools (ADT). This list will provide a forum for users to share experience, to ask questions about things not covered in the documentation, and hopefully, to get answers to these questions. Questions may range from technical to scientific, but should be about docking molecules using AutoDock and its associated programs and utilities. Suggestions for new features are also welcome. Announcements of new software versions and functionalities will be made on this list. In general, bugs should not be reported here but entered into our MGLBugzilla database. Just go to http://mgldev.scripps.edu/bugs/ and click on the "Open a new MGLBugzilla account" link.
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Topics (2882)
Replies Last Post Views
ADL: Can I dock a ligand in more than 1 receptor by autodock vina? by ADARSH BALA
0
by ADARSH BALA
ADL: Diffused view of ligand and pdb by Muzaffar Rehman
1
by konan rene Kambo
ADL: AutoDock Vina in the Cloud by Sarkis Dallakian
0
by Sarkis Dallakian
ADL: PDB to PDBQt = Broken bonds by carlos klinger
5
by Diogo Martins
ADL: The mailing list is back! by Stefano Forli
0
by Stefano Forli
ADL: Covalent Docking by Ariel GarcĂ­a Fleitas
1
by Diogo Martins
ADL: Can Vina distinguish stereoisomers? by Jayanthi J Kumar
1
by Diogo Martins
ADL: visualization problem by Muzaffar Rehman
4
by Muzaffar Rehman
ADL: very high torsion energy by abhisek Mondal
1
by Pawan Kumar
Re: ADL: mgl mac os by Muzaffar Rehman
0
by Muzaffar Rehman
ADL: test by Diogo Martins
0
by Diogo Martins
ADL: testtest by Ludovic Autin
0
by Ludovic Autin
ADL: *** MAIL SERVER TEST *** by Stefano Forli
0
by Stefano Forli
ADL: *** MAIL SERVER TEST *** by Stefano Forli
0
by Stefano Forli
ADL: Understanding what to learn by Academic Research
0
by Academic Research
ADL: This is just a test by Diogo Martins
0
by Diogo Martins
ADL: Docked ligand is not superimposed over the ligand in the x-ray by ADARSH BALA
0
by ADARSH BALA
ADL: Not able to superimpose docked ligand on the ligand present in the crystal structure by MS_09
0
by MS_09
ADL: Not able to dock exactly where the ligand binds in the crystal structure by ADARSH BALA
0
by ADARSH BALA
ADL: Not able to dock exactly where the ligand binds in the crystal structure by ADARSH BALA
0
by ADARSH BALA
ADL: (no subject) by Priya Kashyap
0
by Priya Kashyap
ADL: Help by ADARSH BALA
0
by ADARSH BALA
ADL: RMSD by Fabian Glaser
0
by Fabian Glaser
ADL: mgl mac os by Fabian Glaser
0
by Fabian Glaser
ADL: "parse error" using pyrx by Luana Dutra
2
by Luana Dutra
ADL: Components of the autodock vina scoring function by Fraser, Keith
1
by Diogo Martins
ADL: exhaustiveness and number of repeated runs by jessica mace
1
by Diogo Martins
ADL: Multiple ROOT/ENDROOT segments by Chitrak Gupta
0
by Chitrak Gupta
ADL: use raccoon on ubuntu platform by Muthusankar
0
by Muthusankar
ADL: Dear team Autodock, Hi Kindly share with me the link of autodock-vina installation for windows 7 , 64 bit, system, compatible with chimera by Maria Yousuf
0
by Maria Yousuf
ADL: Dear team autodock Hi, kindly send me the link of autodock vina for windows 10 , 64bit system by Maria Yousuf
0
by Maria Yousuf
ADL: ADT install error by Rui Chen
0
by Rui Chen
ADL: Problem run autodock4. by Rui Chen
0
by Rui Chen
ADL: Apparent False Positive Malware in Autogrid Executable by Rudy J. Richardson
1
by Rudy J. Richardson
ADL: Interpreting negative steric terms by Gustavo Seabra
5
by bushra TAJ
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