AutoDock

This forum is an archive for the mailing list autodock@scripps.edu (more options) Messages posted here will be sent to this mailing list.
This list is intended for novice and expert users of the ligand-protein and protein-protein docking software AutoDock, AutoGrid and AutoDockTools (ADT). This list will provide a forum for users to share experience, to ask questions about things not covered in the documentation, and hopefully, to get answers to these questions. Questions may range from technical to scientific, but should be about docking molecules using AutoDock and its associated programs and utilities. Suggestions for new features are also welcome. Announcements of new software versions and functionalities will be made on this list. In general, bugs should not be reported here but entered into our MGLBugzilla database. Just go to http://mgldev.scripps.edu/bugs/ and click on the "Open a new MGLBugzilla account" link.
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Topics (2882)
Replies Last Post Views
ADL: Autodock and amber FF by Khaled Barakat
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by Khaled Barakat
ADL: Autodock and amber FF by Khaled Barakat
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by Khaled Barakat
ADL: unsuccesful completition by joe black-2
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by ishwar chandra
Docking problem-eval.cc: error energy is not a number by kingkan
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by ishwar chandra
ADL: how to start from command line by ishwar chandra
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by ishwar chandra
ADL: setting gridcenter from command line using prepare_gpf4.py by Aviyah Peri
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by Gav-2
Re: ADL: correlation between calculated and experimental values. by JORDI-2
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by JORDI-2
ADL: question about energy decomposition by Ming Han
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by cranky
Re: ADL: About number of torsions/runs/evaluations... by Steven Darnell
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by Steven Darnell
ADL: Amber force field with autodock by kbarakat
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by kbarakat
About number of torsions/runs/evaluations... by Jerome Baffreau
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by Jerome Baffreau
Re: ADL: Welcome to the "autodock" mailing list (Digest mode) by ibahun sawkmie
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by ishwar chandra
ADL: get-dockings by Bolser, Diana Kather...
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by Bolser, Diana Kather...
ADL: too many torsions by Gav-2
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by Stefano Forli
Re: ADL: autodock Digest, Vol 53, Issue 30 by Isabel Hilligerk
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by Steven Darnell
ADL: List archives are now hosted on Nabble by sargis
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by sargis
ADL: error when generating GPF by Lisa Brown
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by sargis
Re: ADL: Write complex by George Tzotzos
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by George Tzotzos
ADL: Can't find or open AD4.1_bound.dat by Maura Catherine Moon...
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by chandra sekhar-3
ADL: PhD position in Computational Structural Biology at Cambridge, UK by Swanand Gore
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by Swanand Gore
ADL: Zero Values at Grid Maps by João Teixeira
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by João Teixeira
ADL: Rosetta Academic Training Workshop by Nir London
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by Nir London
ADL: Zero Values at Grid Maps by João Teixeira
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by Riad Schulz
ADL: Magnesium Ion by kbarakat
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by kbarakat
Re: ADL: autodock Digest, Vol 53, Issue 26 by jose correa
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by jose correa
ADL: (no subject) by Bolser, Diana Kather...
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by ikerman
Re: ADL: autodock Digest, Vol 53, Issue 25 by Isabel Hilligerk
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by Isabel Hilligerk
ADL: Question on AutoDock platform support by John Gorski
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by John Gorski
ADL: Missing parameters for the transition metal atoms in AutoDock by Huang Zunnan
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by Huang Zunnan
ADL: Data and Interactions by Isabel Hilligerk
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by Isabel Hilligerk
ADL: virtual screening by bhargavi kondagari
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by Steven Darnell
ADL: why the autogrid file is not showing by ishwar chandra
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by ishwar chandra
ADL: MAX_TORS by Gav-2
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by Hazai Eszter
ADL: regarding Installation of autodock on Linux by ishwar chandra
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by ishwar chandra
ADL: How to intall ADT on Linux by ishwar chandra
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by Daniel Jana
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