AutoDock

This forum is an archive for the mailing list autodock@scripps.edu (more options) Messages posted here will be sent to this mailing list.
This list is intended for novice and expert users of the ligand-protein and protein-protein docking software AutoDock, AutoGrid and AutoDockTools (ADT). This list will provide a forum for users to share experience, to ask questions about things not covered in the documentation, and hopefully, to get answers to these questions. Questions may range from technical to scientific, but should be about docking molecules using AutoDock and its associated programs and utilities. Suggestions for new features are also welcome. Announcements of new software versions and functionalities will be made on this list. In general, bugs should not be reported here but entered into our MGLBugzilla database. Just go to http://mgldev.scripps.edu/bugs/ and click on the "Open a new MGLBugzilla account" link.
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Topics (2859)
Replies Last Post Views
ADL: Magnesium Ion by kbarakat
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by kbarakat
Re: ADL: autodock Digest, Vol 53, Issue 26 by jose correa
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by jose correa
ADL: (no subject) by Bolser, Diana Kather...
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by ikerman
Re: ADL: autodock Digest, Vol 53, Issue 25 by Isabel Hilligerk
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by Isabel Hilligerk
ADL: Question on AutoDock platform support by John Gorski
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by John Gorski
ADL: Missing parameters for the transition metal atoms in AutoDock by Huang Zunnan
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by Huang Zunnan
ADL: Data and Interactions by Isabel Hilligerk
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by Isabel Hilligerk
ADL: virtual screening by bhargavi kondagari
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by Steven Darnell
ADL: why the autogrid file is not showing by ishwar chandra
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by ishwar chandra
ADL: MAX_TORS by Gav-2
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by Hazai Eszter
ADL: regarding Installation of autodock on Linux by ishwar chandra
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by ishwar chandra
ADL: How to intall ADT on Linux by ishwar chandra
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by Daniel Jana
ADL: "list index out of range" Error on OSX by Thomas Coudrat
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by Thomas Coudrat
ADL: parallel by Gav-2
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by Gav-2
ADL: RMSD reference by Isabel Hilligerk
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by Gav-2
Re: ADL: R: Free energies by annalisa bordogna
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by annalisa bordogna
ADL: autodock gridcenter troubles read by Krzysztof Małysiak
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by Krzysztof Małysiak
ADL: Docking RNA by Sebastian Fica
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by tony-9
Re: ADL: autodock Digest, Vol 53, Issue 20 by jose correa
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by jose correa
ADL: Using AutoDock with AutoDockTools tutorial.... by Ruth Huey
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by Ruth Huey
ADL: Upper limit of points in Grid Box by Isabel Hilligerk
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by ikerman
"Total charge" issue when using a phosphate group by Jerome Baffreau
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by Mark Swingle
Re: ADL: autodock Digest, Vol 53, Issue 19 by Isabel Hilligerk
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by Isabel Hilligerk
ADL: questions for using AutoDock for Virtual Screening by Huang Zunnan
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by cranky
ADL: regardin docking by ishwar chandra
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by Marvin Antonio Soria...
ADL: docking metals by Tessa Little
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by Tessa Little
ADL: Error launching Run AutoGrid by art csr
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by Chinsu
ADL: segmentation violation by jose correa
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by jose correa
ADL: Map generation/declaration errors in GPF/DPF files... by Jerome Baffreau
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by Dr. M. Shahid
ADL: Docking issue 2 by Sebastian Fica
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by Sebastian Fica
ADL: Docking issue by Sebastian Fica
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by Sebastian Fica
ADL: FlexRes_PythonError by Maura Catherine Moon...
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by Maura Catherine Moon...
ADL: How to analyze the results by ishwar chandra
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by ishwar chandra
ADL: MGLTools TclError: Togl: couldn't get visual RESOLVED by naba
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by naba
ADL: (no subject) by Cute Abi
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by ishwar chandra
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