AutoDock

This forum is an archive for the mailing list autodock@scripps.edu (more options) Messages posted here will be sent to this mailing list.
This list is intended for novice and expert users of the ligand-protein and protein-protein docking software AutoDock, AutoGrid and AutoDockTools (ADT). This list will provide a forum for users to share experience, to ask questions about things not covered in the documentation, and hopefully, to get answers to these questions. Questions may range from technical to scientific, but should be about docking molecules using AutoDock and its associated programs and utilities. Suggestions for new features are also welcome. Announcements of new software versions and functionalities will be made on this list. In general, bugs should not be reported here but entered into our MGLBugzilla database. Just go to http://mgldev.scripps.edu/bugs/ and click on the "Open a new MGLBugzilla account" link.
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Topics (2911)
Replies Last Post Views
Re: ADL: autodock Digest, Vol 53, Issue 20 by jose correa
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by jose correa
ADL: Using AutoDock with AutoDockTools tutorial.... by Ruth Huey
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by Ruth Huey
ADL: Upper limit of points in Grid Box by Isabel Hilligerk
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by ikerman
"Total charge" issue when using a phosphate group by Jerome Baffreau
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by Mark Swingle
Re: ADL: autodock Digest, Vol 53, Issue 19 by Isabel Hilligerk
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by Isabel Hilligerk
ADL: questions for using AutoDock for Virtual Screening by Huang Zunnan
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by cranky
ADL: regardin docking by ishwar chandra
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by Marvin Antonio Soria...
ADL: docking metals by Tessa Little
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by Tessa Little
ADL: Error launching Run AutoGrid by art csr
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by Chinsu
ADL: segmentation violation by jose correa
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by jose correa
ADL: Map generation/declaration errors in GPF/DPF files... by Jerome Baffreau
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by Dr. M. Shahid
ADL: Docking issue 2 by Sebastian Fica
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by Sebastian Fica
ADL: Docking issue by Sebastian Fica
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by Sebastian Fica
ADL: FlexRes_PythonError by Maura Catherine Moon...
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by Maura Catherine Moon...
ADL: How to analyze the results by ishwar chandra
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by ishwar chandra
ADL: MGLTools TclError: Togl: couldn't get visual RESOLVED by naba
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by naba
ADL: (no subject) by Cute Abi
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by ishwar chandra
ADL: protein-protein by Gav-2
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by Gav-2
Re: ADL: autodock Digest, Vol 53, Issue 14 by Dmitry Kuzmin
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by Dmitry Kuzmin
ADL: AutoDock4: can't find hsg1.SA.map by Bo Baker
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by ikerman
ADL: autodock4 in ubuntu intrepid by geoff.fucile
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by Steffen Möller
ADL: Question by Andrew Ward-5
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by Mark Swingle
ADL: PDBQT to PDB by ikerman
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by ikerman
ADL: binding energy 2 by Gav-2
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by ikerman
ADL: AutoDock4: can't find hsg1.SA.map by Bo Baker
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by Bo Baker
ADL: binding energy by kannan cham
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by ikerman
ADL: extract results from flexible docking by Sebastian Kruggel
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by Sebastian Kruggel
ADL: cannot install ADT on linux. PLease help by Chinsu
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by Steffen Moeller-2
Re: ADL: flexible residues by Frank Neuhaus
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by ikerman
ADL: energy values.... by kannan cham
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by kannan cham
ADL: HNY2009 by ishwar chandra
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by ikerman
ADL: atom type A by Gav-2
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by Gav-2
ADL: will we have to remove all the water molecules by ishwar chandra
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by ishwar chandra
ADL: eval.cc: ERROR! energy is infinite! by toumin
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by toumin
ADL: Help by afaaw27
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by afaaw27
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