AutoDock

This forum is an archive for the mailing list autodock@scripps.edu (more options) Messages posted here will be sent to this mailing list.
This list is intended for novice and expert users of the ligand-protein and protein-protein docking software AutoDock, AutoGrid and AutoDockTools (ADT). This list will provide a forum for users to share experience, to ask questions about things not covered in the documentation, and hopefully, to get answers to these questions. Questions may range from technical to scientific, but should be about docking molecules using AutoDock and its associated programs and utilities. Suggestions for new features are also welcome. Announcements of new software versions and functionalities will be made on this list. In general, bugs should not be reported here but entered into our MGLBugzilla database. Just go to http://mgldev.scripps.edu/bugs/ and click on the "Open a new MGLBugzilla account" link.
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Topics (2859)
Replies Last Post Views
ADL: docking with flexible residues using command line by Syed Tarique Moin
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by Syed Tarique Moin
Re: ADL: autodock Digest, Vol 52, Issue 22 by Sathish Kumar-4
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by Sathish Kumar-4
ADL: How to do virtual screening by ishwar chandra
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by ishwar chandra
ADL: Autodock4 help. by Mukkaysh Srivastav
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by Mukkaysh Srivastav
ADL: error running by art csr
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by ishwar chandra
ADL: using a video recorder in autodock tools by surasak chunsrivirot
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by surasak chunsrivirot
ADL: Why the autogrid is not running by ishwar chandra
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by ishwar chandra
ADL: Patch for building AD4 with G++ 4.3 by Dmitry Kuzmin
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by Dmitry Kuzmin
Re: ADL: autodock Digest, Vol 52, Issue 16 by art csr
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by art csr
ADL: where can I find the training set of AD4 by hongkaizhang
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by hongkaizhang
ADL: Autogrid is not running by ishwar chandra
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by Wilfred Li
Re: ADL: autodock Digest, Vol 52, Issue 14 by jose correa
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by jose correa
ADL: how to see the molecule by ishwar chandra
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by ikerman
Re: ADL: autodock Digest, Vol 52, Issue 11 by thaniks
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by sargis
ADL: Docking energy values by Mª Victoria Ruiz Pér...
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by Mª Victoria Ruiz Pér...
ADL: Please reply this also by ishwar chandra
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by Wilfred Li
ADL: Problem in reading the dlg file by Guido Leoni
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by Dr. M. Shahid
ADL: the values of binding energy by Fan
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by Fan
ADL: Fwd: autodock Digest, Vol 51, Issue 23 by jose correa
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by Lijo
ADL: the number of flexible residues by 王正
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by 王正
ADL: charge assignment by Dong, L.
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by L. Michel Espinoza-F...
ADL: Unrecognized keyword in docking parameter file by ashwani sharma
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by ashwani sharma
ADL: Question by Andrew Ward-5
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by Andrew Ward-5
ADL: problem with ubuntu 8.10 by antonio muzzle
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by antonio muzzle
Re: ADL: autodock Digest, Vol 52, Issue 8 by thaniks
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by thaniks
ADL: Covalent map and Autogrid 4.0.0 by Andreas Peter Schull...
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by Oleg Trott
ADL: Unable to assign MAP type to atom Mg!!?? by 刘明-3
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by ambivalentno
ADL: Hi by thaniks
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by thaniks
ADL: Showing more than the 1 configuration of the best binding energy in the output file by surasak chunsrivirot
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by surasak chunsrivirot
ADL: Docking energy values by Mª Victoria Ruiz Pér...
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by naga vignesh
ADL: File conversion... by kannan cham
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by mohana lakshmi
ADL: move/ligand by Gav-2
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by Gav-2
Re: ADL: newbie protein protein interaction (Michael Osborne) by David M. Carter
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by David M. Carter
ADL: newbie protein protein interaction by Michael Osborne
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by Michael Osborne
ADL: help macromolecule file.... by kannan cham
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by ikerman
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